Difference between revisions of "TSS:Hg 42294.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000425674.1:0 uc062kbe.1:0 ENST00000437204.1:-62 NR_135301:-62 uc003cyi.1:-62 AK125500:-62 |chr=chr3 |cpg_percent=0.04 |distance=0 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:40518 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=50156023 | |end=50156023 | ||
| + | |end_of_center_position=50156003 | ||
|entrez_id=100129060 | |entrez_id=100129060 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=RBM5-AS1 | |gene_alias=RBM5-AS1 | ||
|gene_description=SEMA3F antisense RNA 1 | |gene_description=SEMA3F antisense RNA 1 | ||
| − | |gene_id= | + | |gene_id=100129060 |
|gene_name=SEMA3F antisense RNA 1 | |gene_name=SEMA3F antisense RNA 1 | ||
|gene_source=HGNC:40518 | |gene_source=HGNC:40518 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_135301 | |nearest_refseq=NR_135301 | ||
|nearest_unigene=Hs.627767 | |nearest_unigene=Hs.627767 | ||
| − | |num_trans= | + | |num_trans=100129060 |
|species=human | |species=human | ||
|start=50155981 | |start=50155981 | ||
| + | |start_of_center_position=50156002 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000425674 | + | |transcript_name=ENST00000425674.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_42294.1 | |tss_id=hg_42294.1 | ||
Latest revision as of 21:51, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 50156002 |
|---|---|
| End of the center position in the TSS region: | 50156003 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000425674.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100129060 |
| All_trans: | HGNC:40518 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NR_135301 |
| Entrez ID: | 100129060 |
| Nearest Unigene: | Hs.627767 |
| Nearest Refseq: | NR_135301 |
| Nearest Ensembl: | ENSG00000235016 |
| Gene Name: | SEMA3F antisense RNA 1 |
| Gene Alias: | RBM5-AS1 |
| Gene Description: | SEMA3F antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
