Difference between revisions of "TSS:Hg 48328.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000606246.1:106 uc062xmb.1:106 |chr=chr4 |cpg_percent=0.025 |distance=106 |distance_to_tss=4639 |end=76256347 |entrez_id=100129583 |gc_percent=0.5...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:34343 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=106 | |distance=106 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4618 |
|end=76256347 | |end=76256347 | ||
| + | |end_of_center_position=76256339 | ||
|entrez_id=100129583 | |entrez_id=100129583 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001136570 | |nearest_refseq=NM_001136570 | ||
|nearest_unigene=Hs.720509 | |nearest_unigene=Hs.720509 | ||
| − | |num_trans= | + | |num_trans=100129583 |
|species=human | |species=human | ||
|start=76256330 | |start=76256330 | ||
| + | |start_of_center_position=76256338 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000606246 | + | |transcript_name=ENST00000606246.1 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_48328.1 | |tss_id=hg_48328.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=U3KQR7 | |uniprot_id=U3KQR7 | ||
}} | }} | ||
Latest revision as of 00:03, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 76256338 |
|---|---|
| End of the center position in the TSS region: | 76256339 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000606246.1 |
|---|---|
| Distance: | 106 |
| Num_trans: | 100129583 |
| All_trans: | HGNC:34343 |
TATA-Box annotation
| Distance to TSS: | 4618 |
|---|---|
| Nearest PromoterID: | NM_001136570 |
| Entrez ID: | 100129583 |
| Nearest Unigene: | Hs.720509 |
| Nearest Refseq: | NM_001136570 |
| Nearest Ensembl: | ENSG00000189157 |
| Gene Name: | family with sequence similarity 47 member E |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 47 member E |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
