Difference between revisions of "TSS:Hg 49424.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000602483.5:0 ENST00000602819.5:0 NR_034011:0 NR_034010:0 NR_003584:0 uc062zfe.1:0 uc021xqz.2:0 BC017993:0 BC039555:6 ENST00000602414.5:-41 ENST00...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |NCRNA00060= |
| + | |all_trans=HGNC:33098 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=118278768 | |end=118278768 | ||
| + | |end_of_center_position=118278759 | ||
|entrez_id=100093630 | |entrez_id=100093630 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=LINC00060 | + | |gene_alias=LINC00060{{!}}NCRNA00060 |
|gene_description=small nucleolar RNA host gene 8 | |gene_description=small nucleolar RNA host gene 8 | ||
|gene_id=100093630 | |gene_id=100093630 | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=HGNC:33098 | |hgnc_mgi_id=HGNC:33098 | ||
|nearest_ensembl=ENSG00000269893 | |nearest_ensembl=ENSG00000269893 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_034011 |
|nearest_refseq=NR_003584 | |nearest_refseq=NR_003584 | ||
|nearest_unigene=Hs.535762 | |nearest_unigene=Hs.535762 | ||
| − | |num_trans= | + | |num_trans=100093630 |
|species=human | |species=human | ||
|start=118278749 | |start=118278749 | ||
| + | |start_of_center_position=118278758 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000602483.5 ENST00000602819. | + | |transcript_name=ENST00000602483.5 ENST00000652022.1 ENST00000602819.6 ENST00000665363.1 ENST00000602414.6 BC017993 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_49424.1 | |tss_id=hg_49424.1 | ||
Latest revision as of 00:26, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 118278758 |
|---|---|
| End of the center position in the TSS region: | 118278759 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000602483.5 ENST00000652022.1 ENST00000602819.6 ENST00000665363.1 ENST00000602414.6 BC017993 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100093630 |
| All_trans: | HGNC:33098 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NR_034011 |
| Entrez ID: | 100093630 |
| Nearest Unigene: | Hs.535762 |
| Nearest Refseq: | NR_003584 |
| Nearest Ensembl: | ENSG00000269893 |
| Gene Name: | small nucleolar RNA host gene 8 |
| Gene Alias: | LINC00060|NCRNA00060 |
| Gene Description: | small nucleolar RNA host gene 8 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
