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Difference between revisions of "TSS:Hg 63797.1"

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Line 2: Line 2:
 
|SRAP=
 
|SRAP=
 
|STRAA1=
 
|STRAA1=
|all_trans=BC040043:18 LQ718468:91 LF343258:-112 MA578835:-112 AK024640:-140 ENST00000523259.5:-147 ENST00000602875.5:-147 AF092038:-152 ENST00000602775.5:-157 NM_001253764:-157 NR_045587:-157 BC067895:-157 NM_001035235:-174 BC156760:-189 BC152788:-189 AB590502:-189 LF211016:-199 MA446593:-199 ENST00000520427.1:-378 AF293024:-378 AF293025:-378 AF293026:-378 DQ286291:-378
+
|all_trans=HGNC:11281
 
|chr=chr5
 
|chr=chr5
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 24: Line 24:
 
|nearest_refseq=NM_001035235
 
|nearest_refseq=NM_001035235
 
|nearest_unigene=Hs.653135
 
|nearest_unigene=Hs.653135
|num_trans=23
+
|num_trans=10011
 
|pp7684=
 
|pp7684=
 
|species=human
 
|species=human

Latest revision as of 05:38, 22 July 2021

Basic information about the TSS


TSS ID:hg_63797.1
Species:human
Chr:chr5
TSS Classification:yes
Start:140557289
End:140557299
Strand:-
TSS Score:1
Start of the center position in the TSS region:140557294
End of the center position in the TSS region:140557295



Gene and protein annotation


Transcript_name:BC040043
Distance:18
GeneID:10011
HGNC/MGI_ID:HGNC:11281
UniProt_ID:
Gene_name:steroid receptor RNA activator 1
Gene_symbol:SRA1
Gene_synonyms:SRA STRAA1
Gene_source:HGNC:11281



Transcript annotation


Transcript_name:BC040043
Distance:18
Num_trans:10011
All_trans:HGNC:11281



TATA-Box annotation


Distance to TSS:162
Nearest PromoterID:NR_045587
Entrez ID:10011
Nearest Unigene:Hs.653135
Nearest Refseq:NM_001035235
Nearest Ensembl:ENSG00000213523
Gene Name:steroid receptor RNA activator 1
Gene Alias:SRA|SRAP|STRAA1|pp7684
Gene Description:steroid receptor RNA activator 1
Gene Type:protein-coding
CpG%:0.09
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):