Difference between revisions of "TSS:Hg 65812.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001100829:430 ENST00000379426.1:481 uc010jpa.5:481 |chr=chr6 |cpg_percent=0.15 |distance=430 |distance_to_tss=-459 |end=11537797 |entrez_id=100113407...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:34244 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=19 |
|end=11537797 | |end=11537797 | ||
| + | |end_of_center_position=11537768 | ||
|entrez_id=100113407 | |entrez_id=100113407 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001100829 | |nearest_refseq=NM_001100829 | ||
|nearest_unigene=Hs.146317 | |nearest_unigene=Hs.146317 | ||
| − | |num_trans= | + | |num_trans=100113407 |
|species=human | |species=human | ||
|start=11537738 | |start=11537738 | ||
| + | |start_of_center_position=11537767 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000379426.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_65812.1 | |tss_id=hg_65812.1 | ||
Latest revision as of 06:22, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11537767 |
|---|---|
| End of the center position in the TSS region: | 11537768 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000379426.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100113407 |
| All_trans: | HGNC:34244 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_001100829 |
| Entrez ID: | 100113407 |
| Nearest Unigene: | Hs.146317 |
| Nearest Refseq: | NM_001100829 |
| Nearest Ensembl: | ENSG00000205269 |
| Gene Name: | transmembrane protein 170B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 170B |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
