Difference between revisions of "TSS:Hg 70897.1"
From referenceTSS
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=-37(CGCCATATAAAA,-,0.00),-35(CCATATAAAAGC,-,0.00) | |tata_box=-37(CGCCATATAAAA,-,0.00),-35(CCATATAAAAGC,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=NR_160978.1 NR_160980.1 NR_160977.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_70897.1 | |tss_id=hg_70897.1 | ||
Latest revision as of 08:12, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 158869815 |
|---|---|
| End of the center position in the TSS region: | 158869816 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_160978.1 NR_160980.1 NR_160977.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | NR_160977:0 NR_160978:0 NR_160980:0 ENST00000654049.1:28 ENST00000486232.2:31 ENST00000666927.1:34 ENST00000653976.1:34 ENST00000659187.1:35 ENST00000663769.1:35 ENST00000663950.1:47 ENST00000655791.1:47 ENST00000663340.1:79 ENST00000658761.1:90 ENST00000367072.5:90 ENST00000367073.6:138 ENST00000650421.1:167 NR_160976:209 NR_160981:209 NR_160982:209 ENST00000643288.2:318 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NR_160978 |
| Entrez ID: | 100130967 |
| Nearest Unigene: | Hs.32804 |
| Nearest Refseq: | NM_001195032 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 2901 |
| Gene Alias: | - |
| Gene Description: | chromosome 6 open reading frame 99 |
| Gene Type: | ncRNA |
| CpG%: | 0.155 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -37(CGCCATATAAAA,-,0.00),-35(CCATATAAAAGC,-,0.00) |
