Difference between revisions of "TSS:Hg 71812.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans= |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=9628 | |distance_to_tss=9628 | ||
|end=13273820 | |end=13273820 | ||
| + | |end_of_center_position=13273815 | ||
|entrez_id=100130357 | |entrez_id=100130357 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100130357 | |gene_description=uncharacterized LOC100130357 | ||
| − | |gene_name=LOC100130357 | + | |gene_id=100130357 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC100130357 |
| + | |gene_source=EntrezGene:100130357 | ||
| + | |gene_symbol=LOC100130357 | ||
| + | |gene_synonyms= | ||
| + | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_134859 | |nearest_promoter_id=NR_134859 | ||
|nearest_refseq=NM_001242698 | |nearest_refseq=NM_001242698 | ||
|nearest_unigene=Hs.484678 | |nearest_unigene=Hs.484678 | ||
| − | |num_trans= | + | |num_trans=100130357 |
|species=human | |species=human | ||
|start=13273808 | |start=13273808 | ||
| + | |start_of_center_position=13273814 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000606627 | + | |transcript_name=ENST00000606627.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_71812.1 | |tss_id=hg_71812.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 08:31, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13273814 |
|---|---|
| End of the center position in the TSS region: | 13273815 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000606627.1 |
|---|---|
| Distance: | -239 |
| Num_trans: | 100130357 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9628 |
|---|---|
| Nearest PromoterID: | NR_134859 |
| Entrez ID: | 100130357 |
| Nearest Unigene: | Hs.484678 |
| Nearest Refseq: | NM_001242698 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100130357 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130357 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
