Difference between revisions of "TSS:Hg 72403.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NR_103455:276 NR_103456:276 ENST00000600652.1:299 AK127889:299 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:48982 | |hgnc_mgi_id=HGNC:48982 | ||
|nearest_ensembl=ENSG00000269293 | |nearest_ensembl=ENSG00000269293 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_103455 |
|nearest_refseq=NR_103455 | |nearest_refseq=NR_103455 | ||
|nearest_unigene=Hs.659413 | |nearest_unigene=Hs.659413 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=28137591 | |start=28137591 | ||
|start_of_center_position=28137596 | |start_of_center_position=28137596 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_103456 | + | |transcript_name=NR_103455.1 NR_103456.1 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_72403.1 | |tss_id=hg_72403.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 08:44, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 28137596 |
|---|---|
| End of the center position in the TSS region: | 28137597 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_103455.1 NR_103456.1 |
|---|---|
| Distance: | 276 |
| Num_trans: | 4 |
| All_trans: | NR_103455:276 NR_103456:276 ENST00000600652.1:299 AK127889:299 |
TATA-Box annotation
| Distance to TSS: | -281 |
|---|---|
| Nearest PromoterID: | NR_103455 |
| Entrez ID: | 100129195 |
| Nearest Unigene: | Hs.659413 |
| Nearest Refseq: | NR_103455 |
| Nearest Ensembl: | ENSG00000269293 |
| Gene Name: | ZSCAN16 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | ZSCAN16 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
