Difference between revisions of "TSS:Hg 72404.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_103456:329 NR_103455:329 ENST00000600652.1:352 uc003nkk.3:352 AK127889:352 |chr=chr6 |cpg_percent=0.01 |distance=329 |distance_to_tss=-343 |end=28137...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NR_103455:329 NR_103456:329 ENST00000600652.1:352 AK127889:352 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-343 | |distance_to_tss=-343 | ||
|end=28137673 | |end=28137673 | ||
| + | |end_of_center_position=28137659 | ||
|entrez_id=100129195 | |entrez_id=100129195 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:48982 | |hgnc_mgi_id=HGNC:48982 | ||
|nearest_ensembl=ENSG00000269293 | |nearest_ensembl=ENSG00000269293 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_103455 |
|nearest_refseq=NR_103455 | |nearest_refseq=NR_103455 | ||
|nearest_unigene=Hs.659413 | |nearest_unigene=Hs.659413 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=28137644 | |start=28137644 | ||
| + | |start_of_center_position=28137658 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_103456 | + | |transcript_name=NR_103455.1 NR_103456.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_72404.1 | |tss_id=hg_72404.1 | ||
Latest revision as of 08:44, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28137658 |
|---|---|
| End of the center position in the TSS region: | 28137659 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_103455.1 NR_103456.1 |
|---|---|
| Distance: | 329 |
| Num_trans: | 4 |
| All_trans: | NR_103455:329 NR_103456:329 ENST00000600652.1:352 AK127889:352 |
TATA-Box annotation
| Distance to TSS: | -343 |
|---|---|
| Nearest PromoterID: | NR_103455 |
| Entrez ID: | 100129195 |
| Nearest Unigene: | Hs.659413 |
| Nearest Refseq: | NR_103455 |
| Nearest Ensembl: | ENSG00000269293 |
| Gene Name: | ZSCAN16 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | ZSCAN16 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
