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Difference between revisions of "TSS:Hg 72653.1"

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{{TSSDetail
 
{{TSSDetail
−
|all_trans=NR_026816:78 NR_152829:78 NR_152831:78 NR_152832:78 NR_152833:78 NR_152834:78 NR_152835:78 NR_152836:78 NR_152830:78 NR_152837:78 NR_152828:78 NR_152838:78 NR_152839:78 LC027945:78 LC027946:78 LC050979:78 LC050980:78 LC050981:78 LC050982:78 LC050983:78 LC050984:78 LC050985:78 LC050986:78 LC050987:78 LC050988:78 LC050989:78 LC050990:78 LC050991:78 KY781167:193
+
|all_trans=HGNC:17203
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 22: Line 22:
 
|nearest_refseq=NM_001134284
 
|nearest_refseq=NM_001134284
 
|nearest_unigene=Hs.670091
 
|nearest_unigene=Hs.670091
−
|num_trans=29
+
|num_trans=100130889
 
|species=human
 
|species=human
 
|start=31186394
 
|start=31186394
Line 28: Line 28:
 
|strand=-
 
|strand=-
 
|tata_box=-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)
 
|tata_box=-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)
−
|transcript_name=NR_026816 NR_152829 NR_152831 NR_152832 NR_152833 NR_152834 NR_152835 NR_152836 NR_152830 NR_152837 NR_152828 NR_152838 NR_152839 LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991
+
|transcript_name=LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_72653.1
 
|tss_id=hg_72653.1

Latest revision as of 08:50, 22 July 2021

Basic information about the TSS

TSS ID:hg_72653.1
Species:human
Chr:chr6
TSS Classification:no
Start:31186394
End:31186408
Strand:-
TSS Score:1
Start of the center position in the TSS region:31186401
End of the center position in the TSS region:31186402



Gene and protein annotation

Transcript_name:LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991
Distance:78
GeneID:100130889
HGNC/MGI_ID:HGNC:17203
UniProt_ID:
Gene_name:psoriasis susceptibility 1 candidate 3
Gene_symbol:PSORS1C3
Gene_synonyms:NCRNA00196
Gene_source:HGNC:17203



Transcript annotation

Transcript_name:LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991
Distance:78
Num_trans:100130889
All_trans:HGNC:17203



TATA-Box annotation

Distance to TSS:-84
Nearest PromoterID:NR_152837
Entrez ID:100130889
Nearest Unigene:Hs.670091
Nearest Refseq:NM_001134284
Nearest Ensembl:
Gene Name:psoriasis susceptibility 1 candidate 3
Gene Alias:NCRNA00196
Gene Description:psoriasis susceptibility 1 candidate 3
Gene Type:ncRNA
CpG%:0.035
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)
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