Difference between revisions of "TSS:Hg 75267.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:21090 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |dJ493F7.3= | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=704 |
|end=116512348 | |end=116512348 | ||
| + | |end_of_center_position=116512343 | ||
|entrez_id=254228 | |entrez_id=254228 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=C6orf188 | + | |gene_alias=C6orf188{{!}}FAM26E{{!}}dJ493F7.3 |
| − | |gene_description=family | + | |gene_description=calcium homeostasis modulator family member 5 |
|gene_id=100128327 | |gene_id=100128327 | ||
| − | |gene_name=trafficking protein particle complex | + | |gene_name=trafficking protein particle complex subunit 3L |
|gene_source=HGNC:21090 | |gene_source=HGNC:21090 | ||
|gene_symbol=TRAPPC3L | |gene_symbol=TRAPPC3L | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_153711 | |nearest_refseq=NM_153711 | ||
|nearest_unigene=Hs.105081 | |nearest_unigene=Hs.105081 | ||
| − | |num_trans= | + | |num_trans=100128327 |
|species=human | |species=human | ||
|start=116512337 | |start=116512337 | ||
| + | |start_of_center_position=116512342 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000356128 | + | |transcript_name=ENST00000356128.4 AK002042 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_75267.1 | |tss_id=hg_75267.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5T215 | |uniprot_id=Q5T215 | ||
}} | }} | ||
Latest revision as of 09:46, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116512342 |
|---|---|
| End of the center position in the TSS region: | 116512343 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000356128.4 AK002042 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100128327 |
| All_trans: | HGNC:21090 |
TATA-Box annotation
| Distance to TSS: | 704 |
|---|---|
| Nearest PromoterID: | NM_153711 |
| Entrez ID: | 254228 |
| Nearest Unigene: | Hs.105081 |
| Nearest Refseq: | NM_153711 |
| Nearest Ensembl: | ENSG00000178033 |
| Gene Name: | trafficking protein particle complex subunit 3L |
| Gene Alias: | C6orf188|FAM26E|dJ493F7.3 |
| Gene Description: | calcium homeostasis modulator family member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
