Difference between revisions of "TSS:Hg 78446.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |CYPH= |
| + | |HEL-S-69p= | ||
| + | |all_trans=HGNC:9253 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=44796684 | |end=44796684 | ||
| + | |end_of_center_position=44796681 | ||
|entrez_id=5478 | |entrez_id=5478 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=CYPA | + | |gene_alias=CYPA{{!}}CYPH{{!}}HEL-S-69p |
|gene_description=peptidylprolyl isomerase A | |gene_description=peptidylprolyl isomerase A | ||
|gene_id=5478 | |gene_id=5478 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:9253 | |hgnc_mgi_id=HGNC:9253 | ||
|nearest_ensembl=ENSG00000196262 | |nearest_ensembl=ENSG00000196262 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_021130 |
|nearest_refseq=NM_021130 | |nearest_refseq=NM_021130 | ||
|nearest_unigene=Hs.356331 | |nearest_unigene=Hs.356331 | ||
| − | |num_trans= | + | |num_trans=5478 |
|species=human | |species=human | ||
|start=44796677 | |start=44796677 | ||
| + | |start_of_center_position=44796680 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-34(TGGTATAAAAGG,-,0.00) |
| − | |transcript_name=ENST00000481437.5 ENST00000451562 | + | |transcript_name=ENST00000481437.5 ENST00000451562.5 ENST00000489459.5 ENST00000355968.10 ENST00000676977.1 ENST00000677107.1 ENST00000468812.6 ENST00000479021.1 ENST00000415933.5 BC005982 AK290851 BC007104 BC013915 AK293003 AK130101 AK316564 AK026569 BC093076 AK297340 D28351 BC005320 AK290085 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_78446.1 | |tss_id=hg_78446.1 | ||
Latest revision as of 10:55, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44796680 |
|---|---|
| End of the center position in the TSS region: | 44796681 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000481437.5 ENST00000451562.5 ENST00000489459.5 ENST00000355968.10 ENST00000676977.1 ENST00000677107.1 ENST00000468812.6 ENST00000479021.1 ENST00000415933.5 BC005982 AK290851 BC007104 BC013915 AK293003 AK130101 AK316564 AK026569 BC093076 AK297340 D28351 BC005320 AK290085 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5478 |
| All_trans: | HGNC:9253 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_021130 |
| Entrez ID: | 5478 |
| Nearest Unigene: | Hs.356331 |
| Nearest Refseq: | NM_021130 |
| Nearest Ensembl: | ENSG00000196262 |
| Gene Name: | peptidylprolyl isomerase A |
| Gene Alias: | CYPA|CYPH|HEL-S-69p |
| Gene Description: | peptidylprolyl isomerase A |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TGGTATAAAAGG,-,0.00) |
