Difference between revisions of "TSS:Hg 82139.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_027387:-31 BC036622:51 ENST00000564834.1:-369 uc011kvo.4:-369 |chr=chr7 |cpg_percent=0.13 |distance=-31 |distance_to_tss=39 |end=152464171 |entrez_id...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_027387:-31 BC036622:51 ENST00000564834.1 | + | |all_trans=NR_027387:-31 BC036622:51 ENST00000564834.1:-369 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=152464171 | |end=152464171 | ||
| + | |end_of_center_position=152464163 | ||
|entrez_id=100128822 | |entrez_id=100128822 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_027387 | |nearest_refseq=NR_027387 | ||
|nearest_unigene=Hs.647112 | |nearest_unigene=Hs.647112 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=152464154 | |start=152464154 | ||
| + | |start_of_center_position=152464162 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NR_027387 | + | |transcript_name=NR_027387.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_82139.1 | |tss_id=hg_82139.1 | ||
Latest revision as of 12:15, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 152464162 |
|---|---|
| End of the center position in the TSS region: | 152464163 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_027387.1 |
|---|---|
| Distance: | -31 |
| Num_trans: | 3 |
| All_trans: | NR_027387:-31 BC036622:51 ENST00000564834.1:-369 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NR_027387 |
| Entrez ID: | 100128822 |
| Nearest Unigene: | Hs.647112 |
| Nearest Refseq: | NR_027387 |
| Nearest Ensembl: | ENSG00000261455 |
| Gene Name: | long intergenic non-protein coding RNA 1003 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1003 |
| Gene Type: | ncRNA |
| CpG%: | 0.13 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
