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Difference between revisions of "TSS:Hg 82396.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|GCS1L=
 
|GCS1L=
|all_trans=AB097049:-21 AF082324:-21 NM_006869:-73 ENST00000265846.9:-87 uc003sjo.6:-87 BC033747:107 AB587419:111 KJ898337:113 AJ006422:-310
+
|all_trans=HGNC:16486
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.19
 
|cpg_percent=0.19
 
|distance=-21
 
|distance=-21
|distance_to_tss=83
+
|distance_to_tss=80
 
|end=954610
 
|end=954610
 
|end_of_center_position=954601
 
|end_of_center_position=954601
 
|entrez_id=11033
 
|entrez_id=11033
 
|gc_percent=0.845771
 
|gc_percent=0.845771
|gene_alias=CENTA1
+
|gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4
 
|gene_description=ArfGAP with dual PH domains 1
 
|gene_description=ArfGAP with dual PH domains 1
 
|gene_id=11033
 
|gene_id=11033
Line 23: Line 23:
 
|nearest_refseq=NM_006869
 
|nearest_refseq=NM_006869
 
|nearest_unigene=Hs.602573
 
|nearest_unigene=Hs.602573
|num_trans=9
+
|num_trans=11033
 
|p42IP4=
 
|p42IP4=
 
|species=human
 
|species=human

Latest revision as of 12:21, 22 July 2021

Basic information about the TSS


TSS ID:hg_82396.1
Species:human
Chr:chr7
TSS Classification:yes
Start:954590
End:954610
Strand:-
TSS Score:1
Start of the center position in the TSS region:954600
End of the center position in the TSS region:954601



Gene and protein annotation


Transcript_name:AB097049 AF082324
Distance:-21
GeneID:11033
HGNC/MGI_ID:HGNC:16486
UniProt_ID:
Gene_name:ArfGAP with dual PH domains 1
Gene_symbol:ADAP1
Gene_synonyms:GCS1L
Gene_source:HGNC:16486



Transcript annotation


Transcript_name:AB097049 AF082324
Distance:-21
Num_trans:11033
All_trans:HGNC:16486



TATA-Box annotation


Distance to TSS:80
Nearest PromoterID:NM_006869
Entrez ID:11033
Nearest Unigene:Hs.602573
Nearest Refseq:NM_006869
Nearest Ensembl:ENSG00000105963
Gene Name:ArfGAP with dual PH domains 1
Gene Alias:CENTA1|GCS1L|p42IP4
Gene Description:ArfGAP with dual PH domains 1
Gene Type:protein-coding
CpG%:0.19
GC%:0.845771
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):