Difference between revisions of "TSS:Hg 85445.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000490493.1:0 uc064guo.1:0 |chr=chr7 |cpg_percent=0.04 |distance=0 |distance_to_tss=-19343 |end=105600879 |entrez_id=100130771 |gc_percent=0.54228...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:34531 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-19330 |
|end=105600879 | |end=105600879 | ||
| + | |end_of_center_position=105600873 | ||
|entrez_id=100130771 | |entrez_id=100130771 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 15: | Line 16: | ||
|gene_symbol=EFCAB10 | |gene_symbol=EFCAB10 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:34531 | |hgnc_mgi_id=HGNC:34531 | ||
|nearest_ensembl=ENSG00000185055 | |nearest_ensembl=ENSG00000185055 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355531 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001355526 |
|nearest_unigene=Hs.719432 | |nearest_unigene=Hs.719432 | ||
| − | |num_trans= | + | |num_trans=100130771 |
|species=human | |species=human | ||
|start=105600865 | |start=105600865 | ||
| + | |start_of_center_position=105600872 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000490493 | + | |transcript_name=ENST00000490493.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_85445.1 | |tss_id=hg_85445.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8YDC4 |
}} | }} | ||
Latest revision as of 13:27, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 105600872 |
|---|---|
| End of the center position in the TSS region: | 105600873 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000490493.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100130771 |
| All_trans: | HGNC:34531 |
TATA-Box annotation
| Distance to TSS: | -19330 |
|---|---|
| Nearest PromoterID: | NM_001355531 |
| Entrez ID: | 100130771 |
| Nearest Unigene: | Hs.719432 |
| Nearest Refseq: | NM_001355526 |
| Nearest Ensembl: | ENSG00000185055 |
| Gene Name: | EF-hand calcium binding domain 10 |
| Gene Alias: | - |
| Gene Description: | EF-hand calcium binding domain 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
