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Difference between revisions of "TSS:Hg 87003.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC031272:-255 BC045795:-259 ENST00000395731.5:-282 NR_038945:-282 AK303289:-282 ENST00000493904.3:-309 ENST00000655797.1:-429
+
|all_trans=HGNC:48956
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NR_038945
 
|nearest_refseq=NR_038945
 
|nearest_unigene=Hs.248137
 
|nearest_unigene=Hs.248137
|num_trans=7
+
|num_trans=100128264
 
|species=human
 
|species=human
 
|start=155071261
 
|start=155071261

Latest revision as of 14:00, 22 July 2021

Basic information about the TSS


TSS ID:hg_87003.1
Species:human
Chr:chr7
TSS Classification:no
Start:155071261
End:155071275
Strand:-
TSS Score:1
Start of the center position in the TSS region:155071268
End of the center position in the TSS region:155071269



Gene and protein annotation


Transcript_name:BC031272
Distance:-255
GeneID:100128264
HGNC/MGI_ID:HGNC:48956
UniProt_ID:
Gene_name:HTR5A antisense RNA 1
Gene_symbol:HTR5A-AS1
Gene_synonyms:
Gene_source:HGNC:48956



Transcript annotation


Transcript_name:BC031272
Distance:-255
Num_trans:100128264
All_trans:HGNC:48956



TATA-Box annotation


Distance to TSS:289
Nearest PromoterID:NR_038945
Entrez ID:100128264
Nearest Unigene:Hs.248137
Nearest Refseq:NR_038945
Nearest Ensembl:ENSG00000220575
Gene Name:HTR5A antisense RNA 1
Gene Alias:HTR5AOS
Gene Description:HTR5A antisense RNA 1
Gene Type:ncRNA
CpG%:0.11
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):