Difference between revisions of "TSS:Hg 87533.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ZNF372= | |ZNF372= | ||
| − | |all_trans= | + | |all_trans=HGNC:18469 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=-48 | |distance=-48 | ||
| − | |distance_to_tss= | + | |distance_to_tss=93 |
|end=17156580 | |end=17156580 | ||
|end_of_center_position=17156575 | |end_of_center_position=17156575 | ||
|entrez_id=51201 | |entrez_id=51201 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=DHHC2 | + | |gene_alias=DHHC2{{!}}ZNF372 |
|gene_description=zinc finger DHHC-type containing 2 | |gene_description=zinc finger DHHC-type containing 2 | ||
|gene_id=51201 | |gene_id=51201 | ||
| − | |gene_name=zinc finger DHHC-type | + | |gene_name=zinc finger DHHC-type palmitoyltransferase 2 |
|gene_source=HGNC:18469 | |gene_source=HGNC:18469 | ||
|gene_symbol=ZDHHC2 | |gene_symbol=ZDHHC2 | ||
| − | |gene_synonyms=ZNF372 | + | |gene_synonyms=DHHC2 ZNF372 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:18469 | |hgnc_mgi_id=HGNC:18469 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_016353 | |nearest_refseq=NM_016353 | ||
|nearest_unigene=Hs.728241 | |nearest_unigene=Hs.728241 | ||
| − | |num_trans= | + | |num_trans=51201 |
|species=human | |species=human | ||
|start=17156569 | |start=17156569 | ||
|start_of_center_position=17156574 | |start_of_center_position=17156574 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BC039253 | + | |transcript_name=BC039253 HM005679 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_87533.1 | |tss_id=hg_87533.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A140VKD9 |
}} | }} | ||
Latest revision as of 14:11, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17156574 |
|---|---|
| End of the center position in the TSS region: | 17156575 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC039253 HM005679 |
|---|---|
| Distance: | -48 |
| Num_trans: | 51201 |
| All_trans: | HGNC:18469 |
TATA-Box annotation
| Distance to TSS: | 93 |
|---|---|
| Nearest PromoterID: | NM_016353 |
| Entrez ID: | 51201 |
| Nearest Unigene: | Hs.728241 |
| Nearest Refseq: | NM_016353 |
| Nearest Ensembl: | ENSG00000104219 |
| Gene Name: | zinc finger DHHC-type palmitoyltransferase 2 |
| Gene Alias: | DHHC2|ZNF372 |
| Gene Description: | zinc finger DHHC-type containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
