Difference between revisions of "TSS:Hg 87734.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |PCOLC= |
| + | |PCP= | ||
| + | |PCP2= | ||
| + | |TLD= | ||
| + | |all_trans=HGNC:1067 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-170 |
|end=22165217 | |end=22165217 | ||
| + | |end_of_center_position=22165202 | ||
|entrez_id=649 | |entrez_id=649 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=OI13 | + | |gene_alias=OI13{{!}}PCOLC{{!}}PCP{{!}}PCP2{{!}}TLD |
|gene_description=bone morphogenetic protein 1 | |gene_description=bone morphogenetic protein 1 | ||
|gene_id=649 | |gene_id=649 | ||
| Line 14: | Line 19: | ||
|gene_source=HGNC:1067 | |gene_source=HGNC:1067 | ||
|gene_symbol=BMP1 | |gene_symbol=BMP1 | ||
| − | |gene_synonyms= | + | |gene_synonyms=BMP-1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:1067 | |hgnc_mgi_id=HGNC:1067 | ||
|nearest_ensembl=ENSG00000168487 | |nearest_ensembl=ENSG00000168487 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006129 |
|nearest_refseq=NM_001199 | |nearest_refseq=NM_001199 | ||
|nearest_unigene=Hs.1274 | |nearest_unigene=Hs.1274 | ||
| − | |num_trans= | + | |num_trans=649 |
|species=human | |species=human | ||
|start=22165186 | |start=22165186 | ||
| + | |start_of_center_position=22165201 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-84(TTCCCTAAAAAG,-,0.00),-82(CCCTAAAAAGGG,+,0.00) |
| − | |transcript_name=ENST00000520970.5 | + | |transcript_name=ENST00000520970.5 AB209590 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_87734.1 | |tss_id=hg_87734.1 | ||
Latest revision as of 14:16, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22165201 |
|---|---|
| End of the center position in the TSS region: | 22165202 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000520970.5 AB209590 |
|---|---|
| Distance: | 0 |
| Num_trans: | 649 |
| All_trans: | HGNC:1067 |
TATA-Box annotation
| Distance to TSS: | -170 |
|---|---|
| Nearest PromoterID: | NM_006129 |
| Entrez ID: | 649 |
| Nearest Unigene: | Hs.1274 |
| Nearest Refseq: | NM_001199 |
| Nearest Ensembl: | ENSG00000168487 |
| Gene Name: | bone morphogenetic protein 1 |
| Gene Alias: | OI13|PCOLC|PCP|PCP2|TLD |
| Gene Description: | bone morphogenetic protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(TTCCCTAAAAAG,-,0.00),-82(CCCTAAAAAGGG,+,0.00) |
