Difference between revisions of "TSS:Hg 8793.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000471578.5:73 | + | |all_trans=NR_136288:53 NR_136289:53 NR_136290:53 ENST00000471578.5:73 NM_001322304:262 NR_136291:262 NR_136293:262 NR_136292:262 NR_136297:262 NR_136295:262 NR_136296:262 NR_136294:262 NM_001322302:262 NM_001322303:262 ENST00000483512.5:325 ENST00000498126.5:338 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=53 |
|distance_to_tss=-73 | |distance_to_tss=-73 | ||
|end=224434587 | |end=224434587 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:26802 | |hgnc_mgi_id=HGNC:26802 | ||
|nearest_ensembl=ENSG00000143786 | |nearest_ensembl=ENSG00000143786 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_136289 |
|nearest_refseq=NM_152495 | |nearest_refseq=NM_152495 | ||
|nearest_unigene=Hs.731723 | |nearest_unigene=Hs.731723 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=224434547 | |start=224434547 | ||
|start_of_center_position=224434567 | |start_of_center_position=224434567 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_136288.1 NR_136290.1 NR_136289.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_8793.1 | |tss_id=hg_8793.1 | ||
Latest revision as of 14:20, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 224434567 |
|---|---|
| End of the center position in the TSS region: | 224434568 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_136288.1 NR_136290.1 NR_136289.1 |
|---|---|
| Distance: | 53 |
| Num_trans: | 16 |
| All_trans: | NR_136288:53 NR_136289:53 NR_136290:53 ENST00000471578.5:73 NM_001322304:262 NR_136291:262 NR_136293:262 NR_136292:262 NR_136297:262 NR_136295:262 NR_136296:262 NR_136294:262 NM_001322302:262 NM_001322303:262 ENST00000483512.5:325 ENST00000498126.5:338 |
TATA-Box annotation
| Distance to TSS: | -73 |
|---|---|
| Nearest PromoterID: | NR_136289 |
| Entrez ID: | 149111 |
| Nearest Unigene: | Hs.731723 |
| Nearest Refseq: | NM_152495 |
| Nearest Ensembl: | ENSG00000143786 |
| Gene Name: | cornichon family AMPA receptor auxiliary protein 3 |
| Gene Alias: | CNIH-3 |
| Gene Description: | cornichon family AMPA receptor auxiliary protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
