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Difference between revisions of "TSS:Hg 87994.1"

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Line 2: Line 2:
 
|NF-M=
 
|NF-M=
 
|NFM=
 
|NFM=
|all_trans=AF181990:-453
+
|all_trans=HGNC:7734
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.005
 
|cpg_percent=0.005
 
|distance=-453
 
|distance=-453
|distance_to_tss=2682
+
|distance_to_tss=2637
 
|end=24917628
 
|end=24917628
 
|end_of_center_position=24917624
 
|end_of_center_position=24917624
 
|entrez_id=4741
 
|entrez_id=4741
 
|gc_percent=0.492537
 
|gc_percent=0.492537
|gene_alias=NEF3
+
|gene_alias=NEF3{{!}}NF-M{{!}}NFM
 
|gene_description=neurofilament medium
 
|gene_description=neurofilament medium
 
|gene_id=4741
 
|gene_id=4741
|gene_name="neurofilament, medium polypeptide"
+
|gene_name=neurofilament medium chain
 
|gene_source=HGNC:7734
 
|gene_source=HGNC:7734
 
|gene_symbol=NEFM
 
|gene_symbol=NEFM
Line 24: Line 24:
 
|nearest_refseq=NM_005382
 
|nearest_refseq=NM_005382
 
|nearest_unigene=Hs.458657
 
|nearest_unigene=Hs.458657
|num_trans=1
+
|num_trans=4741
 
|species=human
 
|species=human
 
|start=24917619
 
|start=24917619

Latest revision as of 14:21, 22 July 2021

Basic information about the TSS


TSS ID:hg_87994.1
Species:human
Chr:chr8
TSS Classification:no
Start:24917619
End:24917628
Strand:+
TSS Score:1
Start of the center position in the TSS region:24917623
End of the center position in the TSS region:24917624



Gene and protein annotation


Transcript_name:AF181990
Distance:-453
GeneID:4741
HGNC/MGI_ID:HGNC:7734
UniProt_ID:Q9UK51
Gene_name:neurofilament medium chain
Gene_symbol:NEFM
Gene_synonyms:NF-M NFM
Gene_source:HGNC:7734



Transcript annotation


Transcript_name:AF181990
Distance:-453
Num_trans:4741
All_trans:HGNC:7734



TATA-Box annotation


Distance to TSS:2637
Nearest PromoterID:NM_001105541
Entrez ID:4741
Nearest Unigene:Hs.458657
Nearest Refseq:NM_005382
Nearest Ensembl:ENSG00000104722
Gene Name:neurofilament medium chain
Gene Alias:NEF3|NF-M|NFM
Gene Description:neurofilament medium
Gene Type:protein-coding
CpG%:0.005
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):