Difference between revisions of "TSS:Hg 88786.1"
From referenceTSS
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| Line 7: | Line 7: | ||
|UEV-2= | |UEV-2= | ||
|UEV2= | |UEV2= | ||
| − | |all_trans= | + | |all_trans=HGNC:12495 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-3 |
|end=48008447 | |end=48008447 | ||
|end_of_center_position=48008429 | |end_of_center_position=48008429 | ||
|entrez_id=7336 | |entrez_id=7336 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=DDVIT1 | + | |gene_alias=DDVIT1{{!}}DDVit-1{{!}}EDAF-1{{!}}EDPF-1{{!}}EDPF1{{!}}MMS2{{!}}UEV-2{{!}}UEV2 |
|gene_description=ubiquitin conjugating enzyme E2 V2 | |gene_description=ubiquitin conjugating enzyme E2 V2 | ||
|gene_id=7336 | |gene_id=7336 | ||
| Line 22: | Line 22: | ||
|gene_source=HGNC:12495 | |gene_source=HGNC:12495 | ||
|gene_symbol=UBE2V2 | |gene_symbol=UBE2V2 | ||
| − | |gene_synonyms=DDVit-1 EDPF-1 MMS2 UEV-2 | + | |gene_synonyms=DDVIT1 DDVit-1 EDAF-1 EDPF-1 EDPF1 MMS2 UEV-2 UEV2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:12495 | |hgnc_mgi_id=HGNC:12495 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_003350 | |nearest_refseq=NM_003350 | ||
|nearest_unigene=Hs.491695 | |nearest_unigene=Hs.491695 | ||
| − | |num_trans= | + | |num_trans=7336 |
|species=human | |species=human | ||
|start=48008409 | |start=48008409 | ||
|start_of_center_position=48008428 | |start_of_center_position=48008428 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000523432.5 ENST00000521346.5 ENST00000518360.5 | + | |transcript_name=ENST00000523432.5 ENST00000521346.5 ENST00000523111.7 ENST00000518360.5 BC016332 BC016710 BC007051 AK313447 U62136 BC062418 BC028673 AF049140 X98091 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_88786.1 | |tss_id=hg_88786.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=G3V113 H0YBP9 H0YBX6 Q15819 | + | |uniprot_id=A0M8W4 G3V113 H0YBP9 H0YBX6 Q15819 |
}} | }} | ||
Latest revision as of 14:38, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48008428 |
|---|---|
| End of the center position in the TSS region: | 48008429 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000523432.5 ENST00000521346.5 ENST00000523111.7 ENST00000518360.5 BC016332 BC016710 BC007051 AK313447 U62136 BC062418 BC028673 AF049140 X98091 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7336 |
| All_trans: | HGNC:12495 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_003350 |
| Entrez ID: | 7336 |
| Nearest Unigene: | Hs.491695 |
| Nearest Refseq: | NM_003350 |
| Nearest Ensembl: | ENSG00000169139 |
| Gene Name: | ubiquitin conjugating enzyme E2 V2 |
| Gene Alias: | DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 |
| Gene Description: | ubiquitin conjugating enzyme E2 V2 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
