Difference between revisions of "TSS:Hg 92040.1"
From referenceTSS
| Line 7: | Line 7: | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance=- | + | |distance=-26 |
|distance_to_tss=97 | |distance_to_tss=97 | ||
|end=17801495 | |end=17801495 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=17801482 | |start_of_center_position=17801482 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001363061.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92040.1 | |tss_id=hg_92040.1 | ||
Latest revision as of 15:48, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17801482 |
|---|---|
| End of the center position in the TSS region: | 17801483 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001363061.2 |
|---|---|
| Distance: | -26 |
| Num_trans: | 14 |
| All_trans: | FJ458439:-56 NM_001363061:-84 LF208094:231 MA443671:231 LF213941:232 MA449518:232 FJ458440:241 NM_001363059:246 NM_001363058:246 NM_001363062:246 NR_156437:246 NM_001363057:376 NM_001363060:376 FJ458441:463 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_001363061 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | microtubule associated scaffold protein 1 |
| Gene Alias: | ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 |
| Gene Description: | microtubule associated scaffold protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
