Difference between revisions of "TSS:Hg 92911.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000517366.1:0 uc064mmj.1:0 ENST00000520262.5:-191 NM_001257180:-191 uc010lxl.5:-191 AK291202:-191 |chr=chr8 |cpg_percent=0.03 |distance=0 |distanc...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | | | + | |GLVR2= |
| + | |IBGC1= | ||
| + | |IBGC3= | ||
| + | |MLVAR= | ||
| + | |PIT-2= | ||
| + | |PIT2= | ||
| + | |RAM1= | ||
| + | |Ram-1= | ||
| + | |all_trans=HGNC:10947 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-16 |
|end=42501269 | |end=42501269 | ||
| + | |end_of_center_position=42501247 | ||
|entrez_id=6575 | |entrez_id=6575 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=GLVR-2 | + | |gene_alias=GLVR-2{{!}}GLVR2{{!}}IBGC1{{!}}IBGC3{{!}}MLVAR{{!}}PIT-2{{!}}PIT2{{!}}RAM1{{!}}Ram-1 |
|gene_description=solute carrier family 20 member 2 | |gene_description=solute carrier family 20 member 2 | ||
|gene_id=6575 | |gene_id=6575 | ||
| Line 21: | Line 30: | ||
|nearest_refseq=NM_006749 | |nearest_refseq=NM_006749 | ||
|nearest_unigene=Hs.653173 | |nearest_unigene=Hs.653173 | ||
| − | |num_trans= | + | |num_trans=6575 |
|species=human | |species=human | ||
|start=42501224 | |start=42501224 | ||
| + | |start_of_center_position=42501246 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-44(CCATTAAGAGGA,+,0.00) |
| − | |transcript_name=ENST00000517366 | + | |transcript_name=ENST00000520262.6 ENST00000517366.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92911.1 | |tss_id=hg_92911.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=E5RGJ6 | + | |uniprot_id=A0A384MR38 E5RGJ6 Q08357 |
}} | }} | ||
Latest revision as of 16:06, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42501246 |
|---|---|
| End of the center position in the TSS region: | 42501247 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000520262.6 ENST00000517366.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6575 |
| All_trans: | HGNC:10947 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_001257180 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -44(CCATTAAGAGGA,+,0.00) |
