Difference between revisions of "TSS:Hg 92920.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10947 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=42541978 | |end=42541978 | ||
| − | |entrez_id= | + | |end_of_center_position=42541937 |
| + | |entrez_id=6575 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias= | + | |gene_alias=GLVR-2{{!}}GLVR2{{!}}IBGC1{{!}}IBGC3{{!}}MLVAR{{!}}PIT-2{{!}}PIT2{{!}}RAM1{{!}}Ram-1 |
| − | |gene_description= | + | |gene_description=solute carrier family 20 member 2 |
|gene_id=6575 | |gene_id=6575 | ||
|gene_name=solute carrier family 20 member 2 | |gene_name=solute carrier family 20 member 2 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:10947 | |hgnc_mgi_id=HGNC:10947 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000168575 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006749 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006749 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.653173 |
| − | |num_trans= | + | |num_trans=6575 |
|species=human | |species=human | ||
|start=42541894 | |start=42541894 | ||
| + | |start_of_center_position=42541936 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000342228.7 | + | |transcript_name=ENST00000342228.7 BC028600 GQ900924 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92920.1 | |tss_id=hg_92920.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q08357 | + | |uniprot_id=A0A384MR38 Q08357 |
}} | }} | ||
Latest revision as of 16:07, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 42541936 |
|---|---|
| End of the center position in the TSS region: | 42541937 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000342228.7 BC028600 GQ900924 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6575 |
| All_trans: | HGNC:10947 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_006749 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
