Difference between revisions of "TSS:Hg 92921.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_006749:-135 ENST00000342228.7:144 uc003xpe.5:144 BC028600:145 ENST00000524237.1:359 uc064mmm.1:359 ENST00000518384.1:489 uc064mml.1:489 |chr=chr8 |cp...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_006749: | + | |GLVR2= |
| + | |IBGC1= | ||
| + | |IBGC3= | ||
| + | |MLVAR= | ||
| + | |PIT-2= | ||
| + | |PIT2= | ||
| + | |RAM1= | ||
| + | |Ram-1= | ||
| + | |all_trans=NM_006749:116 ENST00000342228.7:144 BC028600:145 GQ900924:145 LF384344:145 MA619921:145 ENST00000524237.1:359 ENST00000518384.1:489 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=116 |
| − | |distance_to_tss= | + | |distance_to_tss=-120 |
|end=42542078 | |end=42542078 | ||
| + | |end_of_center_position=42542074 | ||
|entrez_id=6575 | |entrez_id=6575 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=GLVR-2 | + | |gene_alias=GLVR-2{{!}}GLVR2{{!}}IBGC1{{!}}IBGC3{{!}}MLVAR{{!}}PIT-2{{!}}PIT2{{!}}RAM1{{!}}Ram-1 |
|gene_description=solute carrier family 20 member 2 | |gene_description=solute carrier family 20 member 2 | ||
|gene_id=6575 | |gene_id=6575 | ||
| Line 24: | Line 33: | ||
|species=human | |species=human | ||
|start=42542069 | |start=42542069 | ||
| + | |start_of_center_position=42542073 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_006749 | + | |transcript_name=NM_006749.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_92921.1 | |tss_id=hg_92921.1 | ||
Latest revision as of 16:07, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 42542073 |
|---|---|
| End of the center position in the TSS region: | 42542074 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_006749.5 |
|---|---|
| Distance: | 116 |
| Num_trans: | 8 |
| All_trans: | NM_006749:116 ENST00000342228.7:144 BC028600:145 GQ900924:145 LF384344:145 MA619921:145 ENST00000524237.1:359 ENST00000518384.1:489 |
TATA-Box annotation
| Distance to TSS: | -120 |
|---|---|
| Nearest PromoterID: | NM_006749 |
| Entrez ID: | 6575 |
| Nearest Unigene: | Hs.653173 |
| Nearest Refseq: | NM_006749 |
| Nearest Ensembl: | ENSG00000168575 |
| Gene Name: | solute carrier family 20 member 2 |
| Gene Alias: | GLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1 |
| Gene Description: | solute carrier family 20 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
