Difference between revisions of "TSS:Hg 96300.1"
From referenceTSS
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| Line 17: | Line 17: | ||
|P19ARF= | |P19ARF= | ||
|TP16= | |TP16= | ||
| + | |all_trans=HGNC:34341 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=-24 |
|distance_to_tss=315 | |distance_to_tss=315 | ||
|end=21994190 | |end=21994190 | ||
| Line 25: | Line 26: | ||
|entrez_id=1029 | |entrez_id=1029 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=ARF | + | |gene_alias=ARF{{!}}CDK4I{{!}}CDKN2{{!}}CMM2{{!}}INK4{{!}}INK4A{{!}}MLM{{!}}MTS-1{{!}}MTS1{{!}}P14{{!}}P14ARF{{!}}P16{{!}}P16-INK4A{{!}}P16INK4{{!}}P16INK4A{{!}}P19{{!}}P19ARF{{!}}TP16 |
|gene_description=cyclin dependent kinase inhibitor 2A | |gene_description=cyclin dependent kinase inhibitor 2A | ||
| − | |gene_name= | + | |gene_id=100048912 |
| + | |gene_name=CDKN2B antisense RNA 1 | ||
| + | |gene_source=HGNC:34341 | ||
| + | |gene_symbol=CDKN2B-AS1 | ||
| + | |gene_synonyms=ANRIL CDKN2B-AS NCRNA00089 PCAT12 RP11-145E5.4 p15AS | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:34341 | ||
|nearest_ensembl=ENSG00000147889 | |nearest_ensembl=ENSG00000147889 | ||
|nearest_promoter_id=NM_058195 | |nearest_promoter_id=NM_058195 | ||
|nearest_refseq=NM_000077 | |nearest_refseq=NM_000077 | ||
|nearest_unigene=Hs.512599 | |nearest_unigene=Hs.512599 | ||
| − | |num_trans= | + | |num_trans=100048912 |
|species=human | |species=human | ||
|start=21994162 | |start=21994162 | ||
|start_of_center_position=21994176 | |start_of_center_position=21994176 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000468603.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_96300.1 | |tss_id=hg_96300.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:21, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21994176 |
|---|---|
| End of the center position in the TSS region: | 21994177 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000468603.7 |
|---|---|
| Distance: | -24 |
| Num_trans: | 100048912 |
| All_trans: | HGNC:34341 |
TATA-Box annotation
| Distance to TSS: | 315 |
|---|---|
| Nearest PromoterID: | NM_058195 |
| Entrez ID: | 1029 |
| Nearest Unigene: | Hs.512599 |
| Nearest Refseq: | NM_000077 |
| Nearest Ensembl: | ENSG00000147889 |
| Gene Name: | CDKN2B antisense RNA 1 |
| Gene Alias: | ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16 |
| Gene Description: | cyclin dependent kinase inhibitor 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
