Difference between revisions of "TSS:Hg 996.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK129959:0 |chr=chr1 |cpg_percent=0.04 |distance=0 |distance_to_tss=-19495 |end=17520355 |entrez_id=55160 |gc_percent=0.646766 |gene_alias=GrinchGEF |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:25540 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-19358 |
|end=17520355 | |end=17520355 | ||
| + | |end_of_center_position=17520340 | ||
|entrez_id=55160 | |entrez_id=55160 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:25540 | |hgnc_mgi_id=HGNC:25540 | ||
|nearest_ensembl=ENSG00000074964 | |nearest_ensembl=ENSG00000074964 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_137288 |
|nearest_refseq=NM_018125 | |nearest_refseq=NM_018125 | ||
|nearest_unigene=Hs.443460 | |nearest_unigene=Hs.443460 | ||
| − | |num_trans= | + | |num_trans=55160 |
|species=human | |species=human | ||
|start=17520324 | |start=17520324 | ||
| + | |start_of_center_position=17520339 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK129959 | |transcript_name=AK129959 | ||
Latest revision as of 18:33, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17520339 |
|---|---|
| End of the center position in the TSS region: | 17520340 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK129959 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55160 |
| All_trans: | HGNC:25540 |
TATA-Box annotation
| Distance to TSS: | -19358 |
|---|---|
| Nearest PromoterID: | NR_137288 |
| Entrez ID: | 55160 |
| Nearest Unigene: | Hs.443460 |
| Nearest Refseq: | NM_018125 |
| Nearest Ensembl: | ENSG00000074964 |
| Gene Name: | Rho guanine nucleotide exchange factor 10 like |
| Gene Alias: | GrinchGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 10 like |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
