Difference between revisions of "TSS:Hg 998.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000361221.7:26 NM_018125:26 uc001ban.4:26 AB046846:26 AK311076:99 |chr=chr1 |cpg_percent=0.215 |distance=26 |distance_to_tss=-33 |end=17539809 |en...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:25540 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.215 | |cpg_percent=0.215 | ||
|distance=26 | |distance=26 | ||
| − | |distance_to_tss= | + | |distance_to_tss=104 |
|end=17539809 | |end=17539809 | ||
| + | |end_of_center_position=17539803 | ||
|entrez_id=55160 | |entrez_id=55160 | ||
|gc_percent=0.880597 | |gc_percent=0.880597 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_018125 | |nearest_refseq=NM_018125 | ||
|nearest_unigene=Hs.443460 | |nearest_unigene=Hs.443460 | ||
| − | |num_trans= | + | |num_trans=55160 |
|species=human | |species=human | ||
|start=17539795 | |start=17539795 | ||
| + | |start_of_center_position=17539802 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB046846 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_998.1 | |tss_id=hg_998.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:38, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17539802 |
|---|---|
| End of the center position in the TSS region: | 17539803 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB046846 |
|---|---|
| Distance: | 26 |
| Num_trans: | 55160 |
| All_trans: | HGNC:25540 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NR_137287 |
| Entrez ID: | 55160 |
| Nearest Unigene: | Hs.443460 |
| Nearest Refseq: | NM_018125 |
| Nearest Ensembl: | ENSG00000074964 |
| Gene Name: | Rho guanine nucleotide exchange factor 10 like |
| Gene Alias: | GrinchGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 10 like |
| Gene Type: | protein-coding |
| CpG%: | 0.215 |
| GC%: | 0.880597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
