Difference between revisions of "TSS:Hg 9991.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|HBP15/L22= | |HBP15/L22= | ||
|L22= | |L22= | ||
| − | |all_trans= | + | |all_trans=HGNC:10315 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=165 |
| − | |distance_to_tss=- | + | |distance_to_tss=-187 |
|end=6199791 | |end=6199791 | ||
|end_of_center_position=6199782 | |end_of_center_position=6199782 | ||
|entrez_id=6146 | |entrez_id=6146 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=EAP | + | |gene_alias=EAP{{!}}HBP15{{!}}HBP15/L22{{!}}L22 |
|gene_description=ribosomal protein L22 | |gene_description=ribosomal protein L22 | ||
|gene_id=6146 | |gene_id=6146 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_000983 | |nearest_refseq=NM_000983 | ||
|nearest_unigene=Hs.515329 | |nearest_unigene=Hs.515329 | ||
| − | |num_trans= | + | |num_trans=6146 |
|species=human | |species=human | ||
|start=6199772 | |start=6199772 | ||
|start_of_center_position=6199781 | |start_of_center_position=6199781 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC035566 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_9991.1 | |tss_id=hg_9991.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:40, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6199781 |
|---|---|
| End of the center position in the TSS region: | 6199782 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC035566 |
|---|---|
| Distance: | 165 |
| Num_trans: | 6146 |
| All_trans: | HGNC:10315 |
TATA-Box annotation
| Distance to TSS: | -187 |
|---|---|
| Nearest PromoterID: | NM_000983 |
| Entrez ID: | 6146 |
| Nearest Unigene: | Hs.515329 |
| Nearest Refseq: | NM_000983 |
| Nearest Ensembl: | ENSG00000116251 |
| Gene Name: | ribosomal protein L22 |
| Gene Alias: | EAP|HBP15|HBP15/L22|L22 |
| Gene Description: | ribosomal protein L22 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
