Difference between revisions of "TSS:Hg 9999.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000471204.5:-432 uc057btg.1:-432 |chr=chr1 |cpg_percent=0.115 |distance=-432 |distance_to_tss=2668 |end=6208812 |entrez_id=388591 |gc_percent=0.67...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10315 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=-432 | |distance=-432 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2678 |
|end=6208812 | |end=6208812 | ||
| + | |end_of_center_position=6208797 | ||
|entrez_id=388591 | |entrez_id=388591 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_173795 | |nearest_refseq=NM_173795 | ||
|nearest_unigene=Hs.716549 | |nearest_unigene=Hs.716549 | ||
| − | |num_trans= | + | |num_trans=6146 |
|species=human | |species=human | ||
|start=6208781 | |start=6208781 | ||
| + | |start_of_center_position=6208796 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000471204.5 | + | |transcript_name=ENST00000471204.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_9999.1 | |tss_id=hg_9999.1 | ||
Latest revision as of 18:42, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6208796 |
|---|---|
| End of the center position in the TSS region: | 6208797 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000471204.5 |
|---|---|
| Distance: | -432 |
| Num_trans: | 6146 |
| All_trans: | HGNC:10315 |
TATA-Box annotation
| Distance to TSS: | 2678 |
|---|---|
| Nearest PromoterID: | NM_207396 |
| Entrez ID: | 388591 |
| Nearest Unigene: | Hs.716549 |
| Nearest Refseq: | NM_173795 |
| Nearest Ensembl: | ENSG00000158286 |
| Gene Name: | ribosomal protein L22 |
| Gene Alias: | C1orf188 |
| Gene Description: | ring finger protein 207 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
