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Difference between revisions of "TSS:Hg 99999.1"

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Line 7: Line 7:
 
|NFIB2=
 
|NFIB2=
 
|NFIB3=
 
|NFIB3=
|all_trans=ENST00000380953.6:0 NM_001369461:0 NM_001369471:0 NM_001369464:0 NM_001369475:0 NM_001369477:0 NM_001190737:0 NM_001369481:0 ENST00000397575.7:64 NM_005596:87 BX648845:87 ENST00000380959.7:148 ENST00000622520.1:170 U70862:170 ENST00000380921.3:176 LF355359:222 MA590936:222 AK299605:224 ENST00000636063.1:290 LF355360:-354 MA590937:-354 ENST00000397581.6:-371 U85193:413 ENST00000397579.6:-434 LF355358:462 MA590935:462 BC001283:464 AK290603:474 ENST00000637742.1:485
+
|all_trans=HGNC:7785
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 29: Line 29:
 
|nearest_refseq=NM_005596
 
|nearest_refseq=NM_005596
 
|nearest_unigene=Hs.644095
 
|nearest_unigene=Hs.644095
|num_trans=29
+
|num_trans=4781
 
|species=human
 
|species=human
 
|start=14314132
 
|start=14314132
 
|start_of_center_position=14314140
 
|start_of_center_position=14314140
 
|strand=-
 
|strand=-
|transcript_name=ENST00000380953.6 NM_001369461 NM_001369471 NM_001369464 NM_001369475 NM_001369477 NM_001190737 NM_001369481
+
|transcript_name=ENST00000380953.6
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_99999.1
 
|tss_id=hg_99999.1

Latest revision as of 18:42, 22 July 2021

Basic information about the TSS


TSS ID:hg_99999.1
Species:human
Chr:chr9
TSS Classification:yes
Start:14314132
End:14314148
Strand:-
TSS Score:1
Start of the center position in the TSS region:14314140
End of the center position in the TSS region:14314141



Gene and protein annotation


Transcript_name:ENST00000380953.6
Distance:0
GeneID:4781
HGNC/MGI_ID:HGNC:7785
UniProt_ID:O00712
Gene_name:nuclear factor I B
Gene_symbol:NFIB
Gene_synonyms:NFI-RED NFIB2 NFIB3
Gene_source:HGNC:7785



Transcript annotation


Transcript_name:ENST00000380953.6
Distance:0
Num_trans:4781
All_trans:HGNC:7785



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001369461
Entrez ID:4781
Nearest Unigene:Hs.644095
Nearest Refseq:NM_005596
Nearest Ensembl:ENSG00000147862
Gene Name:nuclear factor I B
Gene Alias:CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3
Gene Description:nuclear factor I B
Gene Type:protein-coding
CpG%:0.125
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):