Difference between revisions of "TSS:Mm 100000.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|3200002M13Rik= | |3200002M13Rik= | ||
|Raig3= | |Raig3= | ||
| − | |all_trans=NM_001110337 | + | |all_trans=NM_001110337:106 ENSMUST00000177952.7:114 NM_001110338:114 AY079516:115 ENSMUST00000122967.2:-220 ENSMUST00000133245.1:-241 ENSMUST00000053361.11:416 AK128950:416 ENSMUST00000021071.13:424 ENSMUST00000136785.1:454 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|entrez_id=70355 | |entrez_id=70355 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=1110028I06Rik | + | |gene_alias=1110028I06Rik{{!}}3200002M13Rik{{!}}Raig3 |
| − | |gene_description= | + | |gene_description=G protein-coupled receptor, family C, group 5, member C |
|gene_id=70355 | |gene_id=70355 | ||
| − | |gene_name= | + | |gene_name=G protein-coupled receptor, family C, group 5, member C |
|gene_source=MGI:1917605 | |gene_source=MGI:1917605 | ||
|gene_symbol=Gprc5c | |gene_symbol=Gprc5c | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_147217 | |nearest_refseq=NM_147217 | ||
|nearest_unigene=Mm.242413 | |nearest_unigene=Mm.242413 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=114851392 | |start=114851392 | ||
|start_of_center_position=114851409 | |start_of_center_position=114851409 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001110337 | + | |transcript_name=NM_001110337.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100000.1 | |tss_id=mm_100000.1 | ||
Latest revision as of 10:28, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114851409 |
|---|---|
| End of the center position in the TSS region: | 114851410 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001110337.1 |
|---|---|
| Distance: | 106 |
| Num_trans: | 10 |
| All_trans: | NM_001110337:106 ENSMUST00000177952.7:114 NM_001110338:114 AY079516:115 ENSMUST00000122967.2:-220 ENSMUST00000133245.1:-241 ENSMUST00000053361.11:416 AK128950:416 ENSMUST00000021071.13:424 ENSMUST00000136785.1:454 |
TATA-Box annotation
| Distance to TSS: | -123 |
|---|---|
| Nearest PromoterID: | NM_001110337 |
| Entrez ID: | 70355 |
| Nearest Unigene: | Mm.242413 |
| Nearest Refseq: | NM_147217 |
| Nearest Ensembl: | ENSMUSG00000051043 |
| Gene Name: | G protein-coupled receptor, family C, group 5, member C |
| Gene Alias: | 1110028I06Rik|3200002M13Rik|Raig3 |
| Gene Description: | G protein-coupled receptor, family C, group 5, member C |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
