Difference between revisions of "TSS:Mm 100004.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY079516:-117 ENSMUST00000177952.7:-118 NM_001110338:-118 uc011yhg.1:-118 NM_001110337:-126 uc007mfw.2:-126 ENSMUST00000053361.11:176 AK128950:176 ENSMU...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |3200002M13Rik= |
| + | |Raig3= | ||
| + | |all_trans=MGI:1917605 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=122 | |distance_to_tss=122 | ||
|end=114851666 | |end=114851666 | ||
| + | |end_of_center_position=114851662 | ||
|entrez_id=70355 | |entrez_id=70355 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=1110028I06Rik | + | |gene_alias=1110028I06Rik{{!}}3200002M13Rik{{!}}Raig3 |
| − | |gene_description= | + | |gene_description=G protein-coupled receptor, family C, group 5, member C |
|gene_id=70355 | |gene_id=70355 | ||
| − | |gene_name= | + | |gene_name=G protein-coupled receptor, family C, group 5, member C |
|gene_source=MGI:1917605 | |gene_source=MGI:1917605 | ||
|gene_symbol=Gprc5c | |gene_symbol=Gprc5c | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_147217 | |nearest_refseq=NM_147217 | ||
|nearest_unigene=Mm.242413 | |nearest_unigene=Mm.242413 | ||
| − | |num_trans= | + | |num_trans=70355 |
|species=mouse | |species=mouse | ||
|start=114851657 | |start=114851657 | ||
| + | |start_of_center_position=114851661 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY079516 | |transcript_name=AY079516 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100004.1 | |tss_id=mm_100004.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:29, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114851661 |
|---|---|
| End of the center position in the TSS region: | 114851662 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY079516 |
|---|---|
| Distance: | -117 |
| Num_trans: | 70355 |
| All_trans: | MGI:1917605 |
TATA-Box annotation
| Distance to TSS: | 122 |
|---|---|
| Nearest PromoterID: | NM_001110338 |
| Entrez ID: | 70355 |
| Nearest Unigene: | Mm.242413 |
| Nearest Refseq: | NM_147217 |
| Nearest Ensembl: | ENSMUSG00000051043 |
| Gene Name: | G protein-coupled receptor, family C, group 5, member C |
| Gene Alias: | 1110028I06Rik|3200002M13Rik|Raig3 |
| Gene Description: | G protein-coupled receptor, family C, group 5, member C |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
