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Difference between revisions of "TSS:Mm 100009.1"

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Line 2: Line 2:
 
|3200002M13Rik=
 
|3200002M13Rik=
 
|Raig3=
 
|Raig3=
|all_trans=AK014308:40 ENSMUST00000142262.1:128 BC031439:-129 NM_147217:-154 uc007mfx.2:-154 ENSMUST00000136785.1:-304 ENSMUST00000021071.13:-334 ENSMUST00000053361.11:-342 AK128950:-342
+
|all_trans=MGI:1917605
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 11: Line 11:
 
|entrez_id=70355
 
|entrez_id=70355
 
|gc_percent=0.741294
 
|gc_percent=0.741294
|gene_alias=1110028I06Rik
+
|gene_alias=1110028I06Rik{{!}}3200002M13Rik{{!}}Raig3
|gene_description="G protein-coupled receptor, family C, group 5, member C"
+
|gene_description=G protein-coupled receptor, family C, group 5, member C
 
|gene_id=70355
 
|gene_id=70355
|gene_name="G protein-coupled receptor, family C, group 5, member C"
+
|gene_name=G protein-coupled receptor, family C, group 5, member C
 
|gene_source=MGI:1917605
 
|gene_source=MGI:1917605
 
|gene_symbol=Gprc5c
 
|gene_symbol=Gprc5c
Line 24: Line 24:
 
|nearest_refseq=NM_147217
 
|nearest_refseq=NM_147217
 
|nearest_unigene=Mm.242413
 
|nearest_unigene=Mm.242413
|num_trans=9
+
|num_trans=70355
 
|species=mouse
 
|species=mouse
 
|start=114852183
 
|start=114852183

Latest revision as of 10:29, 26 July 2021

Basic information about the TSS


TSS ID:mm_100009.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114852183
End:114852191
Strand:+
TSS Score:1
Start of the center position in the TSS region:114852187
End of the center position in the TSS region:114852188



Gene and protein annotation


Transcript_name:AK014308
Distance:40
GeneID:70355
HGNC/MGI_ID:MGI:1917605
UniProt_ID:Q8CEU2
Gene_name:G protein-coupled receptor, family C, group 5, member C
Gene_symbol:Gprc5c
Gene_synonyms:1110028I06Rik 3200002M13Rik
Gene_source:MGI:1917605



Transcript annotation


Transcript_name:AK014308
Distance:40
Num_trans:70355
All_trans:MGI:1917605



TATA-Box annotation


Distance to TSS:157
Nearest PromoterID:NM_147217
Entrez ID:70355
Nearest Unigene:Mm.242413
Nearest Refseq:NM_147217
Nearest Ensembl:ENSMUSG00000051043
Gene Name:G protein-coupled receptor, family C, group 5, member C
Gene Alias:1110028I06Rik|3200002M13Rik|Raig3
Gene Description:G protein-coupled receptor, family C, group 5, member C
Gene Type:protein-coding
CpG%:0.09
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):