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Difference between revisions of "TSS:Mm 100018.1"

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Line 6: Line 6:
 
|MMAC8=
 
|MMAC8=
 
|Pigr4=
 
|Pigr4=
|all_trans=ENSMUST00000153245.1:0 AB091765:0 AB091766:0 AB065156:0 AK053160:0 AY457054:0 AB095675:-54 BC139296:-168 BC139297:-168 ENSMUST00000106582.8:-232 ENSMUST00000045151.5:-232 NM_170758:-232 NM_001347654:-232 NM_001359812:-232 AK045869:-232
+
|all_trans=MGI:2443411
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 29: Line 29:
 
|nearest_refseq=NM_170758
 
|nearest_refseq=NM_170758
 
|nearest_unigene=Mm.294439
 
|nearest_unigene=Mm.294439
|num_trans=15
+
|num_trans=217303
 
|species=mouse
 
|species=mouse
 
|start=114890272
 
|start=114890272

Latest revision as of 10:29, 26 July 2021

Basic information about the TSS


TSS ID:mm_100018.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114890272
End:114890370
Strand:+
TSS Score:1
Start of the center position in the TSS region:114890321
End of the center position in the TSS region:114890322



Gene and protein annotation


Transcript_name:ENSMUST00000153245.1 AB091765 AB091766 AB065156 AK053160 AY457054
Distance:0
GeneID:217303
HGNC/MGI_ID:MGI:2443411
UniProt_ID:
Gene_name:CD300A molecule
Gene_symbol:Cd300a
Gene_synonyms:B230315M08Rik Clm8 LMIR1 MAIR-I MMAC8 Pigr4
Gene_source:MGI:2443411



Transcript annotation


Transcript_name:ENSMUST00000153245.1 AB091765 AB091766 AB065156 AK053160 AY457054
Distance:0
Num_trans:217303
All_trans:MGI:2443411



TATA-Box annotation


Distance to TSS:280
Nearest PromoterID:NM_170758
Entrez ID:217303
Nearest Unigene:Mm.294439
Nearest Refseq:NM_170758
Nearest Ensembl:ENSMUSG00000034652
Gene Name:CD300A molecule
Gene Alias:B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1
Gene Description:CD300A molecule
Gene Type:protein-coding
CpG%:0.045
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):