Difference between revisions of "TSS:Mm 100046.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NHERF-1= | |NHERF-1= | ||
|NHERF1= | |NHERF1= | ||
| − | |all_trans= | + | |all_trans=MGI:1349482 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_012030 | |nearest_refseq=NM_012030 | ||
|nearest_unigene=Mm.27842 | |nearest_unigene=Mm.27842 | ||
| − | |num_trans= | + | |num_trans=26941 |
|species=mouse | |species=mouse | ||
|start=115163333 | |start=115163333 | ||
|start_of_center_position=115163340 | |start_of_center_position=115163340 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000021077.3 | + | |transcript_name=ENSMUST00000021077.3 AK085210 AK168894 AK153558 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100046.1 | |tss_id=mm_100046.1 | ||
Latest revision as of 10:29, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115163340 |
|---|---|
| End of the center position in the TSS region: | 115163341 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000021077.3 AK085210 AK168894 AK153558 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26941 |
| All_trans: | MGI:1349482 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_012030 |
| Entrez ID: | 26941 |
| Nearest Unigene: | Mm.27842 |
| Nearest Refseq: | NM_012030 |
| Nearest Ensembl: | ENSMUSG00000020733 |
| Gene Name: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Alias: | EBP-50|NHE-RF|NHERF-1|NHERF1 |
| Gene Description: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
