Difference between revisions of "TSS:Mm 100047.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC085141:-19 U74079:20 AK153558:-33 ENSMUST00000021077.3:-34 NM_012030:-34 uc007mgp.1:-34 AK085210:-34 AK168894:-34 BC038656:86 |chr=chr11 |cpg_percent=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |NHE-RF= |
| + | |NHERF-1= | ||
| + | |NHERF1= | ||
| + | |all_trans=MGI:1349482 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=38 | |distance_to_tss=38 | ||
|end=115163383 | |end=115163383 | ||
| + | |end_of_center_position=115163379 | ||
|entrez_id=26941 | |entrez_id=26941 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=EBP-50 | + | |gene_alias=EBP-50{{!}}NHE-RF{{!}}NHERF-1{{!}}NHERF1 |
| − | |gene_description= | + | |gene_description=solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
|gene_id=26941 | |gene_id=26941 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
|gene_source=MGI:1349482 | |gene_source=MGI:1349482 | ||
|gene_symbol=Slc9a3r1 | |gene_symbol=Slc9a3r1 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_012030 | |nearest_refseq=NM_012030 | ||
|nearest_unigene=Mm.27842 | |nearest_unigene=Mm.27842 | ||
| − | |num_trans= | + | |num_trans=26941 |
|species=mouse | |species=mouse | ||
|start=115163374 | |start=115163374 | ||
| + | |start_of_center_position=115163378 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC085141 | |transcript_name=BC085141 | ||
Latest revision as of 10:29, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115163378 |
|---|---|
| End of the center position in the TSS region: | 115163379 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC085141 |
|---|---|
| Distance: | -19 |
| Num_trans: | 26941 |
| All_trans: | MGI:1349482 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_012030 |
| Entrez ID: | 26941 |
| Nearest Unigene: | Mm.27842 |
| Nearest Refseq: | NM_012030 |
| Nearest Ensembl: | ENSMUSG00000020733 |
| Gene Name: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Alias: | EBP-50|NHE-RF|NHERF-1|NHERF1 |
| Gene Description: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
