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Difference between revisions of "TSS:Mm 100057.1"

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Line 2: Line 2:
 
|NMDAR2C=
 
|NMDAR2C=
 
|NR2C=
 
|NR2C=
|all_trans=AK220084:304 AK210179:-308 AK193026:-312 AK189671:-326 AK202144:-326 AK207970:-326 AK211812:-326 AK214472:-326 AB349270:-360 AK196097:-412 AK203762:-436 AK191682:-449 AK219230:-468 AK207693:-470 AK209579:-470 AK205447:-470 AK190182:-470 AK219640:-470 AK211402:-470 AK211472:-470 AK202321:-470
+
|all_trans=MGI:2444222
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 11: Line 11:
 
|entrez_id=14813
 
|entrez_id=14813
 
|gc_percent=0.621891
 
|gc_percent=0.621891
|gene_alias=GluN2C
+
|gene_alias=GluN2C{{!}}NMDAR2C{{!}}NR2C
|gene_description="glutamate receptor, ionotropic, NMDA2C (epsilon 3)"
+
|gene_description=glutamate receptor, ionotropic, NMDA2C (epsilon 3)
 
|gene_id=320534
 
|gene_id=320534
 
|gene_name=transmembrane protein 104
 
|gene_name=transmembrane protein 104
Line 24: Line 24:
 
|nearest_refseq=NM_010350
 
|nearest_refseq=NM_010350
 
|nearest_unigene=Mm.39090
 
|nearest_unigene=Mm.39090
|num_trans=21
+
|num_trans=320534
 
|species=mouse
 
|species=mouse
 
|start=115245262
 
|start=115245262

Latest revision as of 10:30, 26 July 2021

Basic information about the TSS


TSS ID:mm_100057.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:115245262
End:115245280
Strand:+
TSS Score:1
Start of the center position in the TSS region:115245271
End of the center position in the TSS region:115245272



Gene and protein annotation


Transcript_name:AK220084
Distance:304
GeneID:320534
HGNC/MGI_ID:MGI:2444222
UniProt_ID:
Gene_name:transmembrane protein 104
Gene_symbol:Tmem104
Gene_synonyms:C630005D06Rik
Gene_source:MGI:2444222



Transcript annotation


Transcript_name:AK220084
Distance:304
Num_trans:320534
All_trans:MGI:2444222



TATA-Box annotation


Distance to TSS:21972
Nearest PromoterID:NM_010350
Entrez ID:14813
Nearest Unigene:Mm.39090
Nearest Refseq:NM_010350
Nearest Ensembl:ENSMUSG00000020734
Gene Name:transmembrane protein 104
Gene Alias:GluN2C|NMDAR2C|NR2C
Gene Description:glutamate receptor, ionotropic, NMDA2C (epsilon 3)
Gene Type:protein-coding
CpG%:0.02
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):