Difference between revisions of "TSS:Mm 100072.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC147608:3 BC157912:3 ENSMUST00000093914.4:21 NM_001033775:21 uc007mho.1:21 AK133415:21 |chr=chr11 |cpg_percent=0.02 |distance=3 |distance_to_tss=-25 |e...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Trim47l= |
| + | |all_trans=MGI:3588186 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
|end=115440524 | |end=115440524 | ||
| + | |end_of_center_position=115440520 | ||
|entrez_id=432613 | |entrez_id=432613 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=4933422H20Rik | + | |gene_alias=4933422H20Rik{{!}}Trim47l |
|gene_description=tripartite motif-containing 80 | |gene_description=tripartite motif-containing 80 | ||
|gene_id=432613 | |gene_id=432613 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_001033775 | |nearest_refseq=NM_001033775 | ||
|nearest_unigene=Mm.308822 | |nearest_unigene=Mm.308822 | ||
| − | |num_trans= | + | |num_trans=432613 |
|species=mouse | |species=mouse | ||
|start=115440515 | |start=115440515 | ||
| + | |start_of_center_position=115440519 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC147608 BC157912 | |transcript_name=BC147608 BC157912 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115440519 |
|---|---|
| End of the center position in the TSS region: | 115440520 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC147608 BC157912 |
|---|---|
| Distance: | 3 |
| Num_trans: | 432613 |
| All_trans: | MGI:3588186 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_001033775 |
| Entrez ID: | 432613 |
| Nearest Unigene: | Mm.308822 |
| Nearest Refseq: | NM_001033775 |
| Nearest Ensembl: | ENSMUSG00000070332 |
| Gene Name: | tripartite motif-containing 80 |
| Gene Alias: | 4933422H20Rik|Trim47l |
| Gene Description: | tripartite motif-containing 80 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
