Difference between revisions of "TSS:Mm 100073.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Trim47l= | |Trim47l= | ||
| − | |all_trans= | + | |all_trans=MGI:3588186 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 10: | Line 10: | ||
|entrez_id=432613 | |entrez_id=432613 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=4933422H20Rik | + | |gene_alias=4933422H20Rik{{!}}Trim47l |
|gene_description=tripartite motif-containing 80 | |gene_description=tripartite motif-containing 80 | ||
|gene_id=432613 | |gene_id=432613 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001033775 | |nearest_refseq=NM_001033775 | ||
|nearest_unigene=Mm.308822 | |nearest_unigene=Mm.308822 | ||
| − | |num_trans= | + | |num_trans=432613 |
|species=mouse | |species=mouse | ||
|start=115440540 | |start=115440540 | ||
|start_of_center_position=115440547 | |start_of_center_position=115440547 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000093914.4 | + | |transcript_name=ENSMUST00000093914.4 AK133415 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100073.1 | |tss_id=mm_100073.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 115440547 |
|---|---|
| End of the center position in the TSS region: | 115440548 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000093914.4 AK133415 |
|---|---|
| Distance: | 0 |
| Num_trans: | 432613 |
| All_trans: | MGI:3588186 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001033775 |
| Entrez ID: | 432613 |
| Nearest Unigene: | Mm.308822 |
| Nearest Refseq: | NM_001033775 |
| Nearest Ensembl: | ENSMUSG00000070332 |
| Gene Name: | tripartite motif-containing 80 |
| Gene Alias: | 4933422H20Rik|Trim47l |
| Gene Description: | tripartite motif-containing 80 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
