Difference between revisions of "TSS:Mm 100080.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000146500.1:-20 ENSMUST00000139318.7:-26 ENSMUST00000140567.1:-29 ENSMUST00000133636.7:-44 uc007mhr.1:-44 BC052932:-44 BC053982:-44 |chr=chr11...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MCT 5= |
| + | |MCT 6= | ||
| + | |MCT5= | ||
| + | |all_trans=MGI:2443515 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-20 | |distance=-20 | ||
| − | |distance_to_tss= | + | |distance_to_tss=48 |
|end=115463852 | |end=115463852 | ||
| + | |end_of_center_position=115463848 | ||
|entrez_id=217316 | |entrez_id=217316 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=A130015N09Rik | + | |gene_alias=A130015N09Rik{{!}}MCT 5{{!}}MCT 6{{!}}MCT5 |
| − | |gene_description= | + | |gene_description=solute carrier family 16 (monocarboxylic acid transporters), member 5 |
|gene_id=217316 | |gene_id=217316 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 16 (monocarboxylic acid transporters), member 5 |
|gene_source=MGI:2443515 | |gene_source=MGI:2443515 | ||
|gene_symbol=Slc16a5 | |gene_symbol=Slc16a5 | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=MGI:2443515 | |hgnc_mgi_id=MGI:2443515 | ||
|nearest_ensembl=ENSMUSG00000045775 | |nearest_ensembl=ENSMUSG00000045775 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359609 |
|nearest_refseq=NM_001080934 | |nearest_refseq=NM_001080934 | ||
|nearest_unigene=Mm.25773 | |nearest_unigene=Mm.25773 | ||
| − | |num_trans= | + | |num_trans=217316 |
|species=mouse | |species=mouse | ||
|start=115463843 | |start=115463843 | ||
| + | |start_of_center_position=115463847 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000146500.1 | |transcript_name=ENSMUST00000146500.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115463847 |
|---|---|
| End of the center position in the TSS region: | 115463848 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146500.1 |
|---|---|
| Distance: | -20 |
| Num_trans: | 217316 |
| All_trans: | MGI:2443515 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_001359609 |
| Entrez ID: | 217316 |
| Nearest Unigene: | Mm.25773 |
| Nearest Refseq: | NM_001080934 |
| Nearest Ensembl: | ENSMUSG00000045775 |
| Gene Name: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Alias: | A130015N09Rik|MCT 5|MCT 6|MCT5 |
| Gene Description: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
