Difference between revisions of "TSS:Mm 100090.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3046173 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001002929 | |nearest_refseq=NM_001002929 | ||
|nearest_unigene=Mm.4379 | |nearest_unigene=Mm.4379 | ||
| − | |num_trans= | + | |num_trans=445007 |
|species=mouse | |species=mouse | ||
|start=115564437 | |start=115564437 | ||
|start_of_center_position=115564463 | |start_of_center_position=115564463 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC079856 AK017632 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100090.1 | |tss_id=mm_100090.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115564463 |
|---|---|
| End of the center position in the TSS region: | 115564464 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC079856 AK017632 |
|---|---|
| Distance: | 0 |
| Num_trans: | 445007 |
| All_trans: | MGI:3046173 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001002929 |
| Entrez ID: | 445007 |
| Nearest Unigene: | Mm.4379 |
| Nearest Refseq: | NM_001002929 |
| Nearest Ensembl: | ENSMUSG00000020739 |
| Gene Name: | nucleoporin 85 |
| Gene Alias: | Pcnt1|frount |
| Gene Description: | nucleoporin 85 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
