Difference between revisions of "TSS:Mm 100091.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000128745.1:-18 ENSMUST00000138998.1:-125 |chr=chr11 |cpg_percent=0.02 |distance=-18 |distance_to_tss=17327 |end=115581776 |entrez_id=445007 |g...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3046173 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=17327 | |distance_to_tss=17327 | ||
|end=115581776 | |end=115581776 | ||
| + | |end_of_center_position=115581771 | ||
|entrez_id=445007 | |entrez_id=445007 | ||
| + | |frount= | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=Pcnt1 | + | |gene_alias=Pcnt1{{!}}frount |
|gene_description=nucleoporin 85 | |gene_description=nucleoporin 85 | ||
|gene_id=445007 | |gene_id=445007 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_001002929 | |nearest_refseq=NM_001002929 | ||
|nearest_unigene=Mm.4379 | |nearest_unigene=Mm.4379 | ||
| − | |num_trans= | + | |num_trans=445007 |
|species=mouse | |species=mouse | ||
|start=115581765 | |start=115581765 | ||
| + | |start_of_center_position=115581770 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000128745.1 | |transcript_name=ENSMUST00000128745.1 | ||
Latest revision as of 10:30, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115581770 |
|---|---|
| End of the center position in the TSS region: | 115581771 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000128745.1 |
|---|---|
| Distance: | -18 |
| Num_trans: | 445007 |
| All_trans: | MGI:3046173 |
TATA-Box annotation
| Distance to TSS: | 17327 |
|---|---|
| Nearest PromoterID: | NM_001002929 |
| Entrez ID: | 445007 |
| Nearest Unigene: | Mm.4379 |
| Nearest Refseq: | NM_001002929 |
| Nearest Ensembl: | ENSMUSG00000020739 |
| Gene Name: | nucleoporin 85 |
| Gene Alias: | Pcnt1|frount |
| Gene Description: | nucleoporin 85 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
