Difference between revisions of "TSS:Mm 1001.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000189858.1:-431 AK053567:-431 |chr=chr1 |cpg_percent=0.01 |distance=-431 |distance_to_tss=1034 |end=58714323 |entrez_id=12633 |gc_percent=0.37...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | | | + | |A430105C05Rik= |
| + | |CLARP= | ||
| + | |Cash= | ||
| + | |Casper= | ||
| + | |ENSMUSG00000072980= | ||
| + | |FLAME= | ||
| + | |FLAME-1= | ||
| + | |Flip= | ||
| + | |Gm9845= | ||
| + | |I-FLICE= | ||
| + | |MRIT= | ||
| + | |all_trans=MGI:1336166 | ||
| + | |c-Flip= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 18: | ||
|distance_to_tss=1034 | |distance_to_tss=1034 | ||
|end=58714323 | |end=58714323 | ||
| + | |end_of_center_position=58714320 | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik{{!}}A430105C05Rik{{!}}CLARP{{!}}Cash{{!}}Casper{{!}}FLAME{{!}}FLAME-1{{!}}Flip{{!}}Gm9845{{!}}I-FLICE{{!}}MRIT{{!}}c-Flip |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
| Line 18: | Line 31: | ||
|hgnc_mgi_id=MGI:1336166 | |hgnc_mgi_id=MGI:1336166 | ||
|nearest_ensembl=ENSMUSG00000026031 | |nearest_ensembl=ENSMUSG00000026031 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_009805 |
|nearest_refseq=NM_009805 | |nearest_refseq=NM_009805 | ||
|nearest_unigene=Mm.336848 | |nearest_unigene=Mm.336848 | ||
| − | |num_trans= | + | |num_trans=12633 |
|species=mouse | |species=mouse | ||
|start=58714316 | |start=58714316 | ||
| + | |start_of_center_position=58714319 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=88(GCCTTTAAAAAA,-,0.00) |
|transcript_name=ENSMUST00000189858.1 AK053567 | |transcript_name=ENSMUST00000189858.1 AK053567 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 10:31, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58714319 |
|---|---|
| End of the center position in the TSS region: | 58714320 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000189858.1 AK053567 |
|---|---|
| Distance: | -431 |
| Num_trans: | 12633 |
| All_trans: | MGI:1336166 |
TATA-Box annotation
| Distance to TSS: | 1034 |
|---|---|
| Nearest PromoterID: | NM_009805 |
| Entrez ID: | 12633 |
| Nearest Unigene: | Mm.336848 |
| Nearest Refseq: | NM_009805 |
| Nearest Ensembl: | ENSMUSG00000026031 |
| Gene Name: | CASP8 and FADD-like apoptosis regulator |
| Gene Alias: | 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip |
| Gene Description: | CASP8 and FADD-like apoptosis regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 88(GCCTTTAAAAAA,-,0.00) |
