Difference between revisions of "TSS:Mm 100116.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000151507.1:0 ENSMUST00000144032.1:0 |chr=chr11 |cpg_percent=0.01 |distance=0 |distance_to_tss=-22616 |end=115877548 |entrez_id=66528 |gc_perce...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2685534 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-22616 | |distance_to_tss=-22616 | ||
|end=115877548 | |end=115877548 | ||
| + | |end_of_center_position=115877523 | ||
|entrez_id=66528 | |entrez_id=66528 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_183259 | |nearest_refseq=NM_183259 | ||
|nearest_unigene=Mm.275740 | |nearest_unigene=Mm.275740 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=115877497 | |start=115877497 | ||
| + | |start_of_center_position=115877522 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000151507.1 | + | |transcript_name=ENSMUST00000151507.1 ENSMUST00000222123.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100116.1 | |tss_id=mm_100116.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1Y7VNG3 |
}} | }} | ||
Latest revision as of 10:31, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115877522 |
|---|---|
| End of the center position in the TSS region: | 115877523 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000151507.1 ENSMUST00000222123.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | MGI:2685534 |
TATA-Box annotation
| Distance to TSS: | -22616 |
|---|---|
| Nearest PromoterID: | NM_183259 |
| Entrez ID: | 66528 |
| Nearest Unigene: | Mm.275740 |
| Nearest Refseq: | NM_183259 |
| Nearest Ensembl: | ENSMUSG00000048442 |
| Gene Name: | myosin XVB |
| Gene Alias: | 2210020M01Rik |
| Gene Description: | small integral membrane protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
