Difference between revisions of "TSS:Mm 100128.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Hcngp= | |Hcngp= | ||
| − | |all_trans= | + | |all_trans=MGI:1927479 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 10: | Line 10: | ||
|entrez_id=57230 | |entrez_id=57230 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=2700016D05Rik | + | |gene_alias=2700016D05Rik{{!}}Hcngp |
|gene_description=SAP30 binding protein | |gene_description=SAP30 binding protein | ||
| − | |gene_id= | + | |gene_id=57230 |
|gene_name=SAP30 binding protein | |gene_name=SAP30 binding protein | ||
|gene_source=MGI:1927479 | |gene_source=MGI:1927479 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_020483 | |nearest_refseq=NM_020483 | ||
|nearest_unigene=Mm.267810 | |nearest_unigene=Mm.267810 | ||
| − | |num_trans= | + | |num_trans=57230 |
|species=mouse | |species=mouse | ||
|start=115933629 | |start=115933629 | ||
|start_of_center_position=115933649 | |start_of_center_position=115933649 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000131737.7 | + | |transcript_name=ENSMUST00000131737.7 AK147869 AK012245 BC021757 X68061 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100128.1 | |tss_id=mm_100128.1 | ||
Latest revision as of 10:31, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115933649 |
|---|---|
| End of the center position in the TSS region: | 115933650 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000131737.7 AK147869 AK012245 BC021757 X68061 |
|---|---|
| Distance: | 0 |
| Num_trans: | 57230 |
| All_trans: | MGI:1927479 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_020483 |
| Entrez ID: | 57230 |
| Nearest Unigene: | Mm.267810 |
| Nearest Refseq: | NM_020483 |
| Nearest Ensembl: | ENSMUSG00000020755 |
| Gene Name: | SAP30 binding protein |
| Gene Alias: | 2700016D05Rik|Hcngp |
| Gene Description: | SAP30 binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
