Difference between revisions of "TSS:Mm 10013.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000069573.5:56 NR_030669:56 uc007edb.2:56 AK041603:56 ENSMUST00000139827.7:64 AK137370:108 |chr=chr1 |cpg_percent=0.135 |distance=56 |distance_...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |BB016121= |
| + | |all_trans=MGI:1921515 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-68 | |distance_to_tss=-68 | ||
|end=191907607 | |end=191907607 | ||
| + | |end_of_center_position=191907595 | ||
|entrez_id=98736 | |entrez_id=98736 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=4930557M11Rik | + | |gene_alias=4930557M11Rik{{!}}BB016121 |
|gene_description=RIKEN cDNA 1700034H15 gene | |gene_description=RIKEN cDNA 1700034H15 gene | ||
|gene_id=98736 | |gene_id=98736 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_001024489 | |nearest_refseq=NM_001024489 | ||
|nearest_unigene=Mm.379232 | |nearest_unigene=Mm.379232 | ||
| − | |num_trans= | + | |num_trans=98736 |
|species=mouse | |species=mouse | ||
|start=191907582 | |start=191907582 | ||
| + | |start_of_center_position=191907594 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000069573.5 | + | |transcript_name=ENSMUST00000069573.5 AK041603 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10013.1 | |tss_id=mm_10013.1 | ||
Latest revision as of 10:31, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 191907594 |
|---|---|
| End of the center position in the TSS region: | 191907595 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000069573.5 AK041603 |
|---|---|
| Distance: | 56 |
| Num_trans: | 98736 |
| All_trans: | MGI:1921515 |
TATA-Box annotation
| Distance to TSS: | -68 |
|---|---|
| Nearest PromoterID: | NR_030669 |
| Entrez ID: | 98736 |
| Nearest Unigene: | Mm.379232 |
| Nearest Refseq: | NM_001024489 |
| Nearest Ensembl: | ENSMUSG00000055833 |
| Gene Name: | RIKEN cDNA 1700034H15 gene |
| Gene Alias: | 4930557M11Rik|BB016121 |
| Gene Description: | RIKEN cDNA 1700034H15 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
