Difference between revisions of "TSS:Mm 100148.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Zc3h5= |
| + | |Zc3hdc5= | ||
| + | |all_trans=MGI:2442456 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
|end=116030385 | |end=116030385 | ||
| + | |end_of_center_position=116030345 | ||
|entrez_id=217331 | |entrez_id=217331 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=B230379M23Rik | + | |gene_alias=B230379M23Rik{{!}}Unkh{{!}}Zc3h5{{!}}Zc3hdc5{{!}}mKIAA1753 |
|gene_description=unkempt family zinc finger | |gene_description=unkempt family zinc finger | ||
|gene_id=217331 | |gene_id=217331 | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2442456 | |hgnc_mgi_id=MGI:2442456 | ||
| + | |mKIAA1753= | ||
|nearest_ensembl=ENSMUSG00000020770 | |nearest_ensembl=ENSMUSG00000020770 | ||
|nearest_promoter_id=NM_172569 | |nearest_promoter_id=NM_172569 | ||
|nearest_refseq=NM_172569 | |nearest_refseq=NM_172569 | ||
|nearest_unigene=Mm.297706 | |nearest_unigene=Mm.297706 | ||
| − | |num_trans= | + | |num_trans=217331 |
|species=mouse | |species=mouse | ||
|start=116030304 | |start=116030304 | ||
| + | |start_of_center_position=116030344 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 | + | |transcript_name=ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100148.1 | |tss_id=mm_100148.1 | ||
Latest revision as of 10:32, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116030344 |
|---|---|
| End of the center position in the TSS region: | 116030345 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452 |
|---|---|
| Distance: | 0 |
| Num_trans: | 217331 |
| All_trans: | MGI:2442456 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_172569 |
| Entrez ID: | 217331 |
| Nearest Unigene: | Mm.297706 |
| Nearest Refseq: | NM_172569 |
| Nearest Ensembl: | ENSMUSG00000020770 |
| Gene Name: | unkempt family zinc finger |
| Gene Alias: | B230379M23Rik|Unkh|Zc3h5|Zc3hdc5|mKIAA1753 |
| Gene Description: | unkempt family zinc finger |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
