Difference between revisions of "TSS:Mm 100148.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 2: | Line 2: | ||
|Zc3h5= | |Zc3h5= | ||
|Zc3hdc5= | |Zc3hdc5= | ||
| − | |all_trans= | + | |all_trans=MGI:2442456 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 11: | Line 11: | ||
|entrez_id=217331 | |entrez_id=217331 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=B230379M23Rik | + | |gene_alias=B230379M23Rik{{!}}Unkh{{!}}Zc3h5{{!}}Zc3hdc5{{!}}mKIAA1753 |
|gene_description=unkempt family zinc finger | |gene_description=unkempt family zinc finger | ||
|gene_id=217331 | |gene_id=217331 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_172569 | |nearest_refseq=NM_172569 | ||
|nearest_unigene=Mm.297706 | |nearest_unigene=Mm.297706 | ||
| − | |num_trans= | + | |num_trans=217331 |
|species=mouse | |species=mouse | ||
|start=116030304 | |start=116030304 | ||
|start_of_center_position=116030344 | |start_of_center_position=116030344 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 | + | |transcript_name=ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100148.1 | |tss_id=mm_100148.1 | ||
Latest revision as of 10:32, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116030344 |
|---|---|
| End of the center position in the TSS region: | 116030345 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452 |
|---|---|
| Distance: | 0 |
| Num_trans: | 217331 |
| All_trans: | MGI:2442456 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_172569 |
| Entrez ID: | 217331 |
| Nearest Unigene: | Mm.297706 |
| Nearest Refseq: | NM_172569 |
| Nearest Ensembl: | ENSMUSG00000020770 |
| Gene Name: | unkempt family zinc finger |
| Gene Alias: | B230379M23Rik|Unkh|Zc3h5|Zc3hdc5|mKIAA1753 |
| Gene Description: | unkempt family zinc finger |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
