Difference between revisions of "TSS:Mm 100156.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000135460.1:-30 |chr=chr11 |cpg_percent=0.015 |distance=-30 |distance_to_tss=-5017 |end=116211006 |entrez_id=69681 |gc_percent=0.502488 |gene_a...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Cdk3= |
| + | |all_trans=MGI:1916785 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-5017 | |distance_to_tss=-5017 | ||
|end=116211006 | |end=116211006 | ||
| + | |end_of_center_position=116210985 | ||
|entrez_id=69681 | |entrez_id=69681 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=2310050O10Rik | + | |gene_alias=2310050O10Rik{{!}}Cdk3-ps |
| − | |gene_description= | + | |gene_description=cyclin-dependent kinase 3 |
|gene_id=69535 | |gene_id=69535 | ||
|gene_name=TEN1 telomerase capping complex subunit | |gene_name=TEN1 telomerase capping complex subunit | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NR_004853 | |nearest_refseq=NR_004853 | ||
|nearest_unigene=Mm.33677 | |nearest_unigene=Mm.33677 | ||
| − | |num_trans= | + | |num_trans=69535 |
|species=mouse | |species=mouse | ||
|start=116210963 | |start=116210963 | ||
| + | |start_of_center_position=116210984 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=69(TCTTATAAGGAC,+,0.00) |
|transcript_name=ENSMUST00000135460.1 | |transcript_name=ENSMUST00000135460.1 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 10:32, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116210984 |
|---|---|
| End of the center position in the TSS region: | 116210985 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000135460.1 |
|---|---|
| Distance: | -30 |
| Num_trans: | 69535 |
| All_trans: | MGI:1916785 |
TATA-Box annotation
| Distance to TSS: | -5017 |
|---|---|
| Nearest PromoterID: | NR_004853 |
| Entrez ID: | 69681 |
| Nearest Unigene: | Mm.33677 |
| Nearest Refseq: | NR_004853 |
| Nearest Ensembl: | ENSMUSG00000092300 |
| Gene Name: | TEN1 telomerase capping complex subunit |
| Gene Alias: | 2310050O10Rik|Cdk3-ps |
| Gene Description: | cyclin-dependent kinase 3 |
| Gene Type: | pseudo |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 69(TCTTATAAGGAC,+,0.00) |
